Inference and evaluation of enhancer-mediated gene regulatory network (BioRxiv 2021)
Summary and data
Predictive features of gene expression variation reveal mechanistic link with differential expression (Mol. Sys. Biol. 2020 )
Summary and data
Quantification of differential transcription factor activity and multiomic-based classification into activators and repressors: diffTF (Cell Reports 2019)
Summary and data
CTCF-Mediated Chromatin Loops between Promoter and Gene Body Regulate Alternative Splicing across Individuals (Cell Systems 2017)
Summary and data
SNPhood: Investigate, quantify and visualise the epigenomic neighbourhood of SNPs using NGS data (Bioinformatics 2016)
Summary and software
Genetic Control of Chromatin States and Gene Expression in Humans Involves Local and Distal Chromosomal Interactions (Cell 2015)
Summary and data
Extensive Variation in Chromatin States Across Humans (Science 2013)
Summary and data